Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911410.1_cds_XP_016461393.1_54717
CDS Infomation

[gene=LOC107784733] [db_xref=GeneID:107784733] [protein=E3 ubiquitin-protein ligase SINAT5-like] [protein_id=XP_016461393.1] [location=join(25082..25336,32448..32834,33457..33819)] [gbkey=CDS]
Sequence

ATGGAGTTGGATAGCATTGAATGTATATCATCTTCAGATGGTATAATAGAAGATGATGAG
ATCCCTTTACATCATCCACATATAATTCATTCTCAATTCCCATCTTCAAAATCACCCCTT
AATATCAACAACAATATTAACAATAATAGCAACAGCAATAATAGTGATGGCATTTCAATT
CATTCTACAACTAGTGTTCATGAGCTTCTTGAATGCCCTGTTTGTACCAATTCTATGTAC
CCTCCAATTCATCAGTGCCACAATGGACACACGATCTGTTCGACATGTAAAGCGAGGGCA
CACAACCGATGTCCCACTTGTAGACAAGAGCTTGGAGATATCAGATGCTTAGCACTGGAA
AAAGTGGCTGAATCACTCGAGCTCCCTTGCAAATATGGTTCTGTTGGGTGTCCTGAGATA
TTTCCTTATTACAGTAAGCTAAAACATGAAGCAATATGCAACTTTAGACCATACAACTGC
CCTTATGCTGGGTCTGAGTGCTCGGTTGTCGGTGATATTCCTTACTTGGTTGCTCATTTG
AGGGATGATCACAAGGTAGACATGCATTCGGGGTGCACTTTTAACCATCGCTATGTCAAA
TCTAACCCTCGAGAAGTTGAAAATGCGACGTGGATGTTAACAGTTTTCAATTGTTTTGGT
CAATGCTTCTGTCTCCATTTTGAAGCCTTTCAGCTCGGAACAGCTCCTGTTTACATGGCA
TTTCTTCGTTTTATGGGAGATGAGATAGAGGCTCGAAACTATAGCTACAGCTTGGAAGTT
GGGGGTAATGGAAGAAAACTTACATGGGAAGGTACGCCCCGAAGCATAAGAGACAGTCAC
CGGAAAGTTAGGGATAGCCACGATGGACTCGTTATACAACGTAACATGGCCCTTTTCTTT
TCTGGTGGAGAGAGAAAGGAGCTTAAACTACGAGTAACTGGAAGAATATGGAAAGAACAG
CAGAATCCTGATGGGGGAGTATGTATGCCCAACCTCTGTACTTAA

Peptide Sequence

PEP ID

XP_016461393.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase SINAT5-like [Nicotiana tabacum]
Sequence

MELDSIECISSSDGIIEDDEIPLHHPHIIHSQFPSSKSPLNINNNINNNSNSNNSDGISI
HSTTSVHELLECPVCTNSMYPPIHQCHNGHTICSTCKARAHNRCPTCRQELGDIRCLALE
KVAESLELPCKYGSVGCPEIFPYYSKLKHEAICNFRPYNCPYAGSECSVVGDIPYLVAHL
RDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFNCFGQCFCLHFEAFQLGTAPVYMA
FLRFMGDEIEARNYSYSLEVGGNGRKLTWEGTPRSIRDSHRKVRDSHDGLVIQRNMALFF
SGGERKELKLRVTGRIWKEQQNPDGGVCMPNLCT

Transcript Sequence

Gene sequence data has not been registered.